The detailed information of tRNA gene sequence


Sequence ID>WENV170973095
Genome IDMTKY01012100
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 59
End posion on genome 148
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgggtacgtg
tRNA gene sequence 
GGGGAGGTGCCGGAGTGGACGATCGGGGCCGCCTGCTAAGTGGTTGCACGGGTAACTCTG
TGCCCAGGGTTCGAATCCCTGCCTCCCCGCtg
Downstream region at tRNA end position 
cgctgatcgt
Secondary structure (Cloverleaf model)
>WENV170973095	Ser	GCT
                   g      GCtg cgctgatcgt
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G       + | | |                 T T
    A       T C G G
      C G A        G     TGCACGGGTAACTCTGTGCC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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