The detailed information of tRNA gene sequence


Sequence ID>WENV170973187
Genome IDMTKY01017707
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 693
End posion on genome 608
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgggccctgc
tRNA gene sequence 
GGAGGACTGGCCGAGCGGTCGATGGCGGCTGACTTGAAATCAGCAGAGCGCAAGCTCCGG
GGGTTCGAATCCCTCGTCCTCCGCCA
Downstream region at tRNA end position 
ctcgaccatc
Secondary structure (Cloverleaf model)
>WENV170973187	Ser	TGA
                   c      GCCA ctcgaccatc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     AGAGCGCAAGCTCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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