The detailed information of tRNA gene sequence


Sequence ID>WENV170973331
Genome IDMTKY01028411
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 746
End posion on genome 672
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
caccaacggc
tRNA gene sequence 
GCTGCAGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGAGAGTTCAATCC
TCTCTTGCAGCACCA
Downstream region at tRNA end position 
tccatcccct
Secondary structure (Cloverleaf model)
>WENV170973331	Thr	GGT
                   c      ACCA tccatcccct
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     A - T
                     G + T          C T
                    T     C T C T C     A
        G A        A      | | | | |     A
      T     C T C G       G A G A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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