The detailed information of tRNA gene sequence


Sequence ID>WENV170974313
Genome IDMTKY01057546
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 230
End posion on genome 305
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttggcgccat
tRNA gene sequence 
GGGGCCGTAGCTCAGCTGGGAGAGCGCGTCGTTCGCAATGACGAGGTCAGGGGTTCGATC
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tctttcttgg
Secondary structure (Cloverleaf model)
>WENV170974313	Ala	CGC
                   t      ACCA tctttcttgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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