The detailed information of tRNA gene sequence


Sequence ID>WENV170974424
Genome IDMTKY01060955
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 299
End posion on genome 207
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gaagaagggt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGGGCGACTCGAAATCGTCTAGGCGGTGATGAGCC
GTCTCGTGGGTTCAAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaataacaa
Secondary structure (Cloverleaf model)
>WENV170974424	Ser	CGA
                   t      GCCA aaaataacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGTGATGAGCCGTCTC
                    G - C
                    G + T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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