The detailed information of tRNA gene sequence


Sequence ID>WENV170974718
Genome IDMTKY01072265
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2195
End posion on genome 2107
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgcgtgagT
tRNA gene sequence 
GGAGAGGTGTCCGAGTGGCCGAAGGAGCACGCTTGGAAAGCGTGTGTACGGGTAACCGTA
CCGCGGGTTCGAATCCCGCCCTCTCCGAat
Downstream region at tRNA end position 
cgtgggcatc
Secondary structure (Cloverleaf model)
>WENV170974718	Ser	GGA
                   T      GAat cgtgggcatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TGTACGGGTAACCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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