The detailed information of tRNA gene sequence


Sequence ID>WENV170974940
Genome IDMTKY01081545
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3909
End posion on genome 3996
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
gcctggtcac
tRNA gene sequence
GGAGAGGTGCGAGAGCGGCCGAATCGGACGGTCTCGAAAACCGTTGTCCTGAAAGGGACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
cacctgcggc
Secondary structure (Cloverleaf model)
>WENV170974940	Ser	CGA
                   c      GCCA cacctgcggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G T G G G     C
    G         | | |                 T T
    C       A T C G
      C G A        G     TGTCCTGAAAGGGACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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