The detailed information of tRNA gene sequence


Sequence ID>WENV170975069
Genome IDMTKY01089978
Search identical group
Phylum/Class[MTKY] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 242
End posion on genome 156
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ctatccgagt
tRNA gene sequence 
GCGGAAGTGGCGGAATTGGCAGACGCGCAAGCCTCAGGAGCTTGTGGCCGCAAGGTCGTG
GAGGTTCGAGTCCTCTCTTCCGCACCA
Downstream region at tRNA end position 
ctcgactgag
Secondary structure (Cloverleaf model)
>WENV170975069	Leu	CAG
                   t      ACCA ctcgactgag
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGCCGCAAGGTCGT
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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