The detailed information of tRNA gene sequence


Sequence ID>WENV170975419
Genome IDMTKZ01000530
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 252
End posion on genome 178
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aggcaagcaa
tRNA gene sequence 
GGCCCTGTAGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGTGGGTTCGAG
TCCCATCAGGGTCGCtg
Downstream region at tRNA end position 
agcggtgatg
Secondary structure (Cloverleaf model)
>WENV170975419	Asp	GTC
                   a      GCtg agcggtgatg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C G C G       G T G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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