The detailed information of tRNA gene sequence


Sequence ID>WENV170975681
Genome IDMTKZ01001818
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1232
End posion on genome 1158
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
catcagtgtc
tRNA gene sequence 
GCTCCGGTAGTGTAGTCCGGCCAATCATTTCGGCCTTTCGAGCCGAAGACTCGGGTTCAA
ATCCCGGCCGGAGCAtct
Downstream region at tRNA end position 
cttattaaat
Secondary structure (Cloverleaf model)
>WENV170975681	Glu	TTC
                   c      Atct cttattaaat
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G G C C C     A
    C T G A        A      + | | | |     A
  C         T G T G       T C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        T     AGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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