The detailed information of tRNA gene sequence


Sequence ID>WENV170976298
Genome IDMTKZ01006422
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 54501
End posion on genome 54426
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
caggtttcgc
tRNA gene sequence 
GGTCCCATCGTCTAGTGGCCTAGGACACAGCCCTTTCAAGGCTGCGGCACGGGTTCGAAT
CCCGTTGGGACCGCCA
Downstream region at tRNA end position 
aaaaaatgcc
Secondary structure (Cloverleaf model)
>WENV170976298	Glu	TTC
                   c      GCCA aaaaaatgcc
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGGC
                    C - G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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