The detailed information of tRNA gene sequence


Sequence ID>WENV170976720
Genome IDMTKZ01011170
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 184
End posion on genome 260
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
gacatcgtaa
tRNA gene sequence 
GGGCGATTAGCTCAGCTGGTTAGAGCATCACATTGACATTGTGGAGGTCACAGGTTCGAG
TCCCGTATCGCCCACCA
Downstream region at tRNA end position 
cacccccata
Secondary structure (Cloverleaf model)
>WENV170976720	Val	GAC
                   a      ACCA cacccccata
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G C C C     A
      C G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    T + G
                    C - G
                    A - T
                    C - G
                    A - T
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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