The detailed information of tRNA gene sequence


Sequence ID>WENV170977003
Genome IDMTKZ01015627
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 190
End posion on genome 279
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggtacgccat
tRNA gene sequence 
GGAGAGATGCCTGAGCGGTCGAAAGGACACGCTTGGAGAGCGTGCGTATGAGAAATCGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tgaatatctt
Secondary structure (Cloverleaf model)
>WENV170977003	Ser	GGA
                   t      GCCA tgaatatctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    T       A A G G
      C G A        A     CGTATGAGAAATCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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