The detailed information of tRNA gene sequence


Sequence ID>WENV170977082
Genome IDMTKZ01016747
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 8089
End posion on genome 7998
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaggggacgg
tRNA gene sequence 
GGAGAGATGCCTGAGTGGCCGAAAGGAACGGTTTGCTAAATCGTCGTACGGGTCACACTG
TACCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
aaaccagccg
Secondary structure (Cloverleaf model)
>WENV170977082	Ser	GCT
                   g      GCCA aaaccagccg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C C       G T G G G     C
    G         | | |                 T T
    C       A A G G
      C G A        A     CGTACGGGTCACACTGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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