The detailed information of tRNA gene sequence


Sequence ID>WENV170977774
Genome IDMTKZ01031221
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4771
End posion on genome 4858
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgcctgacg
tRNA gene sequence 
GGAGGGCTGTCCGAGCGGCCGATGGAGCCGGTCTTGAAAACCGGTGGGCGGAAACGCCTC
GTGGGTTCGAATCCCACGCCCTCCGCAA
Downstream region at tRNA end position 
ggcggcccgc
Secondary structure (Cloverleaf model)
>WENV170977774	Ser	TGA
                   g      GCAA ggcggcccgc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G       + | | |                 T T
    C       T G G A
      C G A        G     TGGGCGGAAACGCCTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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