The detailed information of tRNA gene sequence


Sequence ID>WENV170978417
Genome IDMTKZ01050030
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 693
End posion on genome 768
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttttcccac
tRNA gene sequence 
ACGGGTGTAGCTCAGTTGGTAGAGCACTGGTCTCCAAAACCAGGTGTCGGGAGTTCGAGT
CTCTCCTCCCGTGCTA
Downstream region at tRNA end position 
attaaaatgt
Secondary structure (Cloverleaf model)
>WENV170978417	Trp	CCA
                   c      GCTA attaaaatgt
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T   T
                     G - C          T G
                    T     C T C T C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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