The detailed information of tRNA gene sequence


Sequence ID>WENV170978535
Genome IDMTKZ01053278
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9980
End posion on genome 9887
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttatatcagc
tRNA gene sequence 
GGAGAGATGTCCGAGCGGCTGAAGGAGCACGACTGGAAATCGTGTGTATGCCCCCAAAGG
TGTACCGCGGGTTCAAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
tttttatttt
Secondary structure (Cloverleaf model)
>WENV170978535	Ser	GGA
                   c      GCCA tttttatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    G       G C C T       G C G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TGTATGCCCCCAAAGGTGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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