The detailed information of tRNA gene sequence


Sequence ID>WENV170978839
Genome IDMTKZ01063791
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1809
End posion on genome 1735
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aggtgcttgc
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACGTCGCCTTGACATGGCGGAGGTCATGCGTTCGAA
TCGCGTCGGGCCCACtt
Downstream region at tRNA end position 
gagcccaagt
Secondary structure (Cloverleaf model)
>WENV170978839	Val	GAC
                   c      ACtt gagcccaagt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C G C     A
      C G A        G      | + | | |     G
    T       T C T G       A T G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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