The detailed information of tRNA gene sequence


Sequence ID>WENV170979216
Genome IDMTKZ01080889
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2002
End posion on genome 2079
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
taccatttgc
tRNA gene sequence 
GGGGACGTAGTTAAGTCGGTCTATAACGCCGGCCTGTCACGCCGGAGGCCGCGAGTTCAA
GTCTCGTCGTCCCCGCCA
Downstream region at tRNA end position 
ttcttttaat
Secondary structure (Cloverleaf model)
>WENV170979216	Asp	GTC
                   c      GCCA ttcttttaat
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G C T C     A
    C T G A        A      + | | | |     A
  G         A T T G       G C G A G     C
  G         | | | |                 T T
  T         T A A C
    C T A          G     AGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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