The detailed information of tRNA gene sequence


Sequence ID>WENV170979633
Genome IDMTKZ01099824
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 564
End posion on genome 488
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gcagccggga
tRNA gene sequence 
CGGGGTATGGCGCAGTTTGGTAGCGCGTCCGCTTTGGGAGCGGAAGGCCGTCGGTTCGAA
TCCGGCTACCCCGACCA
Downstream region at tRNA end position 
actagagtgt
Secondary structure (Cloverleaf model)
>WENV170979633	Pro	TGG
                   a      ACCA actagagtgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T A
                    T     C G G C C     A
      T G A        G      | + | | |     G
    T       C G C G       G T C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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