The detailed information of tRNA gene sequence


Sequence ID>WENV170979834
Genome IDMTKZ01110152
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1304
End posion on genome 1379
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tcacaggtct
tRNA gene sequence 
GGCCCCGTTGTGTAGCGGCCTAGCACGCGGCCCTCTCAAGGCTGAAACGGCGGTTCGAAT
CCGCTCGGGGCTACGA
Downstream region at tRNA end position 
gtcaacgaaa
Secondary structure (Cloverleaf model)
>WENV170979834	Glu	CTC
                   t      ACGA gtcaacgaaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C G C C     A
      C G A        T      + | | | |     G
    G       T G T G       G G C G G     C
    G       + | | |                 T T
    C       G C A C
      C T A        G     AAAC
                    C - G
                    G + T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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