The detailed information of tRNA gene sequence


Sequence ID>WENV170979892
Genome IDMTKZ01113716
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 490
End posion on genome 574
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gattttgcat
tRNA gene sequence 
GTTGAGGTAGCCAAGCCAGGTATGGCGCAGGGTTGCTAACCCTGTGTCCCTTGGGACTCG
GGGGTTCAAATCCCTCCCTCAACGCtg
Downstream region at tRNA end position 
acacgcaggc
Secondary structure (Cloverleaf model)
>WENV170979892	Ser	GCT
                   t      GCtg acacgcaggc
                     G - C
                     T - A
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | + | | |     A
    C       A C C G       G G G G G     C
    A       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCTTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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