The detailed information of tRNA gene sequence


Sequence ID>WENV170980174
Genome IDMTKZ01126858
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 517
End posion on genome 602
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttattttaa
tRNA gene sequence 
GCCGGGGTGGCCCAGCTTGGTACGGCGCGGGATTGCTAATCCCGTTCTCCTTGTGAGATC
TAGGGTTCAAATCCCTACCCCGGCGCtt
Downstream region at tRNA end position 
tcctacaaga
Secondary structure (Cloverleaf model)
>WENV170980174	Ser	GCT
                   a      GCtt tcctacaaga
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     A T C C C     A
      C G A        G      | | | | |     A
    T       C C C G       T A G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TTCTCCTTGTGAGATC
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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