The detailed information of tRNA gene sequence


Sequence ID>WENV170982631
Genome IDMWVU01174461
Search identical group
Phylum/Class[MWVU] soil metagenome; TG1-5 sample; Antarctic (ecotone) soil
Species
Start position on genome 190
End posion on genome 100
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgaaaagctc
tRNA gene sequence 
GGAGACGTGGCTGAGTGGCTGAAAGCGGCAGTTTGCTAAATTGTTGAGGATCAAAAGTCT
TCCACAGGTTCGAATCCTGTCGTCTCCGCCA
Downstream region at tRNA end position 
gtttgatttt
Secondary structure (Cloverleaf model)
>WENV170982631	Ser	GCT
                   c      GCCA gtttgatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TGAGGATCAAAAGTCTTCC
                    G + T
                    C - G
                    A - T
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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