The detailed information of tRNA gene sequence


Sequence ID>WENV170993314
Genome IDMWWB01260243
Search identical group
Phylum/Class[MWWB] soil metagenome; MS4-1 sample; Antarctic (ecotone) soil
Species
Start position on genome 247
End posion on genome 322
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttttcggcct
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGTGGGTTCGAGT
CCCCCTGCCCCTGCCA
Downstream region at tRNA end position 
gcccaaagcc
Secondary structure (Cloverleaf model)
>WENV170993314	Trp	CCA
                   t      GCCA gcccaaagcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C C C C C     A
      T G A        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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