The detailed information of tRNA gene sequence


Sequence ID>WENV170994167
Genome IDMWWD01023685
Search identical group
Phylum/Class[MWWD] soil metagenome; MS2-2 sample; Antarctic (ecotone) soil
Species
Start position on genome 308
End posion on genome 219
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
attattttgc
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCTTAGTGCACCGGTCTCGAAAATCGGAGTGCCGGAAACGGCA
CCGTGGGTTCAAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gattagattt
Secondary structure (Cloverleaf model)
>WENV170994167	Ser	CGA
                   c      GCCA gattagattt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G T G G G     C
    G       + | | |                 T T
    C       G T G C
      T T A        A     AGTGCCGGAAACGGCACC
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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