The detailed information of tRNA gene sequence


Sequence ID>WENV170995559
Genome IDMWWF01021206
Search identical group
Phylum/Class[MWWF] soil metagenome; MGM-3 sample; Antarctic (ecotone) soil
Species
Start position on genome 454
End posion on genome 542
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttagtatt
tRNA gene sequence 
GGAGACTTGTCCGAGTGGTTGAAGGAGCACGCCTGGAAAGTGTGTATACCTCAAAAGGGT
ATCGAGGGTTCGAATCCCTCAGTCTCCGCtc
Downstream region at tRNA end position 
ttcttttgaa
Secondary structure (Cloverleaf model)
>WENV170995559	Ser	GGA
                   t      GCtc ttcttttgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    T       A G G A
      T G A        G     TATACCTCAAAAGGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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