The detailed information of tRNA gene sequence


Sequence ID>WENV171002387
Genome IDNHNJ01020474
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 130
End posion on genome 218
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgcccgttat
tRNA gene sequence 
GGACAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGTGACCGTC
TCCAGGGTTCGAATCCCTGTCTGTCCGCCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV171002387	Ser	GGA
                   t      GCCn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGTGACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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