The detailed information of tRNA gene sequence


Sequence ID>WENV171002449
Genome IDNHNJ01043662
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 217
End posion on genome 141
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaaattatt
tRNA gene sequence 
GGTGATGTAGCTCAGGTGGTTAGAGCGCAGGATTCATAATCCTGAGGTCGAGAGTTCAAG
TCTCTCCATCACCACCA
Downstream region at tRNA end position 
tctttgaaga
Secondary structure (Cloverleaf model)
>WENV171002449	Met	CAT
                   t      ACCA tctttgaaga
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T C T C     A
      G G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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