The detailed information of tRNA gene sequence


Sequence ID>WENV171002456
Genome IDNHNJ01045434
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 1813
End posion on genome 1901
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgacgttaT
tRNA gene sequence 
GGAGAGGTGGCAGAGCCCGGTTGATCGCGCACGACTCGAAATCGTGTAGGGGTAACACCC
TCGAGGGTTCGAATCCCTCCCTCTCCGTtc
Downstream region at tRNA end position 
taagtaagtc
Secondary structure (Cloverleaf model)
>WENV171002456	Ser	CGA
                   T      GTtc taagtaagtc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     G
  C         G A C G       G A G G G     C
  G         +   | |                 T T
  G         T C G C
    T T G A        G     TAGGGGTAACACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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