The detailed information of tRNA gene sequence


Sequence ID>WENV171002462
Genome IDNHNJ01045771
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 765
End posion on genome 679
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgacgttta
tRNA gene sequence 
GGAGAGGTGGCAGAGCCCGGTTGATCGCGCACGACTCGAAATCGTGTAGGGGTAACACCC
TCGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
taaaaaaaac
Secondary structure (Cloverleaf model)
>WENV171002462	Ser	CGA
                   a      Gttt taaaaaaaac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     G
  C         G A C G       G A G G G     C
  G         +   | |                 T T
  G         T C G C
    T T G A        G     TAGGGGTAACACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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