The detailed information of tRNA gene sequence


Sequence ID>WENV171002612
Genome IDNHNJ01100439
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 250
End posion on genome 336
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ataacaaata
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCAACGCGTAAGTGTTGCC
CGGGTTCGAATCCCGGTCTCTCCGCAA
Downstream region at tRNA end position 
gtaaagaatt
Secondary structure (Cloverleaf model)
>WENV171002612	Ser	GCT
                   a      GCAA gtaaagaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G A C C       C C G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CAACGCGTAAGTGTTGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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