The detailed information of tRNA gene sequence


Sequence ID>WENV171002619
Genome IDNHNJ01104227
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 242
End posion on genome 166
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attcaatact
tRNA gene sequence 
CGGGGAGTAGCTCAGTCTGGTAGAGTGTCTGCTTTGGGAGCAGAAAGTCGCAGGTTCGAA
TCCTGTCTCCCCGACCA
Downstream region at tRNA end position 
ttttttttga
Secondary structure (Cloverleaf model)
>WENV171002619	Pro	TGG
                   t      ACCA ttttttttga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T G T C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C A G G     C
    T       | | | +                 T T
    G       G A G T
      G T A        G     AAGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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