The detailed information of tRNA gene sequence


Sequence ID>WENV171002690
Genome IDNHNJ01135939
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 198
End posion on genome 288
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaaagaaact
tRNA gene sequence 
AGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTATACGCCAAAAGCGT
ATCGAGGGTTCGAATCCCTTCCTCTCTGCAA
Downstream region at tRNA end position 
tgcttgggat
Secondary structure (Cloverleaf model)
>WENV171002690	Ser	GGA
                   t      GCAA tgcttgggat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGCCAAAAGCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK