The detailed information of tRNA gene sequence


Sequence ID>WENV171002822
Genome IDNHNJ01176387
Search identical group
Phylum/Class[NHNJ] marine metagenome; surface waters at 20 m depth at the end of the Scripps Institution of Oceanography (SIO) pier
Species
Start position on genome 645
End posion on genome 731
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttgacgtta
tRNA gene sequence 
GGAGAGGTGGCAGAGCCCGGTTGATCGCGCACGACTCGAAATCGTGTAGGGGTAACACCC
TCGAGGGTTCGAATCCCTCCCTCTCCGttt
Downstream region at tRNA end position 
taaatcgttg
Secondary structure (Cloverleaf model)
>WENV171002822	Ser	CGA
                   a      Gttt taaatcgttg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C C G A        G      | | | | |     G
  C         G A C G       G A G G G     C
  G         +   | |                 T T
  G         T C G C
    T T G A        G     TAGGGGTAACACCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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