The detailed information of tRNA gene sequence


Sequence ID>CL170600001
Genome IDBX908798
Search identical group
Phylum/ClassChlamydiota
SpeciesCandidatus Protochlamydia amoebophila UWE25 [BX908798]
Start position on genome 1882361
End posion on genome 1882289
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttataaatc
tRNA gene sequence 
GGGGGTTTAGCTCAGTTGGTAGAGCATCTGATTTGCATTCAGAGGGTCAGGAGTTCGAAT
CTCCTAGCCTCCAaga
Downstream region at tRNA end position 
tttgctcttg
Secondary structure (Cloverleaf model)
>CL170600001	Ala	TGC
                   c      Aaga tttgctcttg
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T + G
                     T - A          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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