The detailed information of tRNA gene sequence


Sequence ID>CL171000018
Genome IDCP010426
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR20 [CP010426]
Start position on genome 24622
End posion on genome 24536
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ttttctttat
tRNA gene sequence 
GGGCCTGTAGCGCAGTCTGGATAGCGCACTAGCCTTCTAAGCTAGGGGTCGCGGGTTCAA
ATCCCGTCAGGCCCGCtt
Downstream region at tRNA end position 
gcacacgtgg
Secondary structure (Cloverleaf model)
>CL171000018	Arg	TCT
                   t      GCtt gcacacgtgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G C C C     A
    C T G A        A      + | | | |     A
  T         C G C G       G C G G G     C
  G         | | | |                 T T
  G         G C G C
    A T A          A     GGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A *
                    T C T
intron: position=38, length=11 (in A-loop)
AATTTGAGGAG
Intron
Comment/Decision
Genome/Seq. Info.-

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