The detailed information of tRNA gene sequence


Sequence ID>CL171800014
Genome IDCP009095
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesBrucella suis ZW043 [CP009094, CP009095]
Start position on genome 307125
End posion on genome 307009
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ggtgaaatgc
tRNA gene sequence 
GCGGGTGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
CCCCGTCACTCGCGCCA
Downstream region at tRNA end position 
tttcaaactt
Secondary structure (Cloverleaf model)
>CL171800014	Asp	GTC
                   c      GCCA tttcaaactt
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A *
                    G T C
intron: position=38, length=40 (in A-loop)
CGCCGGAGGTCGCGGGTTCGGTTAGAGTGCCGGCCTGTCA
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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