The detailed information of tRNA gene sequence


Sequence ID>CL172000008
Genome IDCP008699
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Hodgkinia cicadicola [CP008699]
Start position on genome 149390
End posion on genome 149320
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
gttcggcggc
tRNA gene sequence 
GCGGTTGTAACTTAACGGTAAAGTGCAAGAATGTGGATCTTGAAAAGGCGATTCGAGTTC
GCCCGACCGTAgcg
Downstream region at tRNA end position 
ctaacgttgt
Secondary structure (Cloverleaf model)
>CL172000008	His	GTG
                   c      Agcg ctaacgttgt
                     G + T
                     C - G
                     G - C
                     G - C
                     T - A
                     T + G
                     G - C          T G
                    T     C C G C T     A
        A A        A      | | | | |     G
      C     T T C A       G G C G A     C
      G     | | | |                 T T
      G     A A G T
        T A        G     AAAA
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  A       A
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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