The detailed information of tRNA gene sequence


Sequence ID>CL172000016
Genome IDCP010426
Search identical group
Phylum/ClassUnclassified
Speciesarchaeon GW2011_AR20 [CP010426]
Start position on genome 658787
End posion on genome 658700
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tctcagtatg
tRNA gene sequence 
ACCGCATTAGTTCAGTGGTTAGAACTTTCGGCTGTGGCCCGGAGGACGCGAGTTCGATTC
TCGCATGCGGTCCtc
Downstream region at tRNA end position 
tttactcaga
Secondary structure (Cloverleaf model)
>CL172000016	His	GTG
                   g      CCtc tttactcaga
                     A - T
                     C - G
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T T
                    T     C G C T C     A
      T G A        A      | | | | |     G
    G       C T T G       G C G A G     C
    G       | | | |                 T T
    T       G A A C
      T A          T     GGAC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  C       C
                  T       G *
                    G T G
intron: position=38, length=15 (in A-loop)
ATTATTTAAGCAGAA
Intron
Comment/Decision
Genome/Seq. Info.-

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