The detailed information of tRNA gene sequence


Sequence ID>CL170100030
Genome IDCP002467
Search identical group
Phylum/ClassAcidobacteriota
SpeciesTerriglobus saanensis SP1PR4 [CP002467]
Start position on genome 1816768
End posion on genome 1817066
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gcgatttcct
tRNA gene sequence 
GCGGGCGTGGTGAAATGGCAGACACAGCGGACTTAAAATCCGCAGACCTTAACCGGTCGT
GTGGGTTCGAGTCCCTCCGCCCGCACCA
Downstream region at tRNA end position 
cacctatatc
Secondary structure (Cloverleaf model)
>CL170100030	Leu	TAA
                   t      ACCA cacctatatc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C C C     A
      T A A        G      |   | | |     G
    G       A G T G       G T G G G     C
    G         | | |                 T T
    C       A C A C
      A G          A     AGACCTTAACCGGTCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=211 (in A-loop)
AAGTAATTGAGTGCCCGTCGGGAAACCGGCGGCGTAGAACTGCTCAAAGTCGGGGAAACCTTAAATGGCA
ATCCCGAGCCAAGCCTGGAAGCACTTCCGGGAAGGTGTAGAGACTAGACGGGCAGCACCTAAACCCCGAG
TGGGGAATGGTGAAGGTATAGTCCAGACCACGAACCCGTACTTGTGGGGCGGTGAAAGCCGAAGTGGTAT
G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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