The detailed information of tRNA gene sequence


Sequence ID>CL170100039
Genome IDCP003130
Search identical group
Phylum/ClassAcidobacteriota
SpeciesGranulicella mallensis MP5ACTX8 [CP003130]
Start position on genome 3962757
End posion on genome 3962456
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cacattccac
tRNA gene sequence 
GCGGGCGTGGTGAAATCGGCAGACACAGCGGACTTAAAATCCGCAGACCTTAACCGGTCG
TGGGGGTTCAAGTCCCCCCGCCCGCACCA
Downstream region at tRNA end position 
caactcccac
Secondary structure (Cloverleaf model)
>CL170100039	Leu	TAA
                   c      ACCA caactcccac
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     A
    C       A G T G       G G G G G     C
    G         | | |                 T T
    G       A C A C
      C A G        A     AGACCTTAACCGGTCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=213 (in A-loop)
AAGGATATTGAGTGCCCGCCAGGGAAACCGGCGGAGCAGAACTGCTCAAAGTCGGGGAAACCTTGAATGG
CAATCCCGAGCCAAGCCTGGATGTTTTCGGGAAGGTGTAGAGACTAGACGGGCAGCACCTTAACCCTCCG
CGAGGAGGGATGGTGAAGGGATAGTCCAGACCACGAACCCGTTCGGCGGGGCGGCGAAAGCCGAAGTGGT
ATG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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