The detailed information of tRNA gene sequence


Sequence ID>CL170100045
Genome IDCP003591
Search identical group
Phylum/ClassCyanobacteriota
SpeciesGeitlerinema sp. PCC 7407 [CP003591]
Start position on genome 729629
End posion on genome 729962
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caatttaacT
tRNA gene sequence 
GGGGGCGTGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGACCCTAAACGGTCGT
GAGGGTTCGAGCCCCTCCGCCCCCATCC
Downstream region at tRNA end position 
Atgtcagccc
Secondary structure (Cloverleaf model)
>CL170100045	Leu	TAA
                   T      ATCC Atgtcagccc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          C G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGACCCTAAACGGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=244 (in A-loop)
AAGGAAATTGAGCCTTGGCGGAGAAATCTGCTAAGTGAATGCTCTCAAACTCAGGGAAACCTAAATCTGC
CCCAAATCGGCAGACACGGCAATCCTGAGCCAAGCCGAAGCCAAACGCTTCGGAAGGTGCAGAGGCCCGA
CGGGAGCTACCCTAACGTCAAGCCGAGGGTAAAGGGAGGGTCCAATTCTCAAAGCCCGCTCGCCAAAGGC
GAAGCGGCGCAGTGGCGAAAGCTACGCGGGAATG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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