The detailed information of tRNA gene sequence


Sequence ID>CL170100046
Genome IDCP003592
Search identical group
Phylum/ClassCyanobacteriota
SpeciesPseudanabaena sp. PCC 7367 [CP003592]
Start position on genome 1711663
End posion on genome 1711271
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
agcaaagctT
tRNA gene sequence 
GGGGGTGTGGCGGAATGGTAGACGCTGCGGACTTAAAATCCGTTGACCTTATAAGTCGTG
AGGGTTCAAGTCCCTCCACCCCCATtt
Downstream region at tRNA end position 
tttttgcagg
Secondary structure (Cloverleaf model)
>CL170100046	Leu	TAA
                   T      ATtt tttttgcagg
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G A G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGACCTTATAAGTCGT
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=307 (in A-loop)
AAGAAAATTGAGCCTTGCTAAAGAAATTTTGCAAGTGTCAGCTCTCAAATTCAGGGAAACCTAAGCCTGG
TAAGTTTAGATTTTGCGATCTAATGCTGGTATGGCAATCCTGAGCCAAGCCCATTGTTGAATTATTTAGC
AGTGGGAAGGTGCAGAGACTCGACGGGAGCTACCCTAACGTGGTGTTTTTTCTGGCTTGACTGGAAATAA
ACCAGGGCGAGGGTAAAGGGAGAGTCCAATTCTCAAAGCCGATCGTGATTAATAGATGTTTTTTAATCAT
GGCAGTGGCGAAAGCTGCGGGAGAATG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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