The detailed information of tRNA gene sequence


Sequence ID>CL170100084
Genome IDCP007067
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesRhizobium leguminosarum bv. trifolii CB782 [CP007067]
Start position on genome 1374518
End posion on genome 1374230
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ggagaaccac
tRNA gene sequence 
GCGGACGTGGTGGAATCGGTAGACACAAGGGACTTAAAATCCCTCGGCCTAGGCTATGCG
GGTTCGACCCCCGCCGTCCGCACCA
Downstream region at tRNA end position 
gccttcgctc
Secondary structure (Cloverleaf model)
>CL170100084	Leu	TAA
                   c      ACCA gccttcgctc
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          C C
                    T     C G C C C     A
      T A A        G      | | | | |     G
    C       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCCTAGGCTAT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=204 (in A-loop)
AAAGCAAAATTGAGTGCACTGGCGGAAACGCCTGATGTAGAACTGCTCAAAGTCGGGGAAACCTGTCAGA
TGGCAATCCCGAGCCAAGCCCTGCAAGGGGAAGGTGTAGAGACTAGACGGGCAGCACCTAAGGCAGGCGC
TAAGGTGAAGGTATAGTCCAGACCACAAACGCCGGAAGGCGGCGGCGAAAGCCGTAGCGGTAAG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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