The detailed information of tRNA gene sequence


Sequence ID>CL170100130
Genome IDCP009435
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia glumae LMG 2196 = ATCC 33617 [CP009434, CP009435]
Start position on genome 2171283
End posion on genome 2171627
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tccgcccttt
tRNA gene sequence 
GCCGGGGTGATGAAATTGGTAAACATAGCGGACTTAAAATCCGCCGCCTTGATTGGCTTG
CCGGTTCGAGTCCGGTCCCCGGCACCA
Downstream region at tRNA end position 
cgcagcttcg
Secondary structure (Cloverleaf model)
>CL170100130	Leu	TAA
                   t      ACCA cgcagcttcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G G C C     A
      T A A        G      + | | | |     G
    T       A G T A       G C C G G     C
    G         | | |                 T T
    G       A C A T
      T A A        A     CGCCTTGATTGGCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=258 (in A-loop)
AAATCATTGAGTGCCCGGTCGGAAACGGCCGGTGCAGAACCCTTCAAATTCGGTGAAACCCCTGGCGCGC
GCCGCGCCGAGGCAACGCCGAGCCAAGCCCGGATGCCGCGCGAGTGCAGACGGGAAGGTGTAGAGACTAG
ACGGAGGGCGCCTAAGGTTGCGCGAGCGGATGAATCGCTTGCCGGCGACGGTGAAGGCATAGTCCAGCGC
ACGAACGGCAGCGCCAGCGCCGCCGGCTTCGAAAGAAGCAGTGTGACG
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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