The detailed information of tRNA gene sequence


Sequence ID>CL170100155
Genome IDCP010522
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesLiberibacter crescens BT-0 [CP010522]
Start position on genome 427398
End posion on genome 427096
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
acataataat
tRNA gene sequence 
GCGGACGTGGCGAAACCGGTAGACGCAGCAGACTTAAAATCTGCTTCTTTATTAAGAGTG
CGGGTTCGAGTCCCGCCGTCCGCACCA
Downstream region at tRNA end position 
aaacatgatt
Secondary structure (Cloverleaf model)
>CL170100155	Leu	TAA
                   t      ACCA aaacatgatt
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C G C C C     A
      C A A        G      | | | | |     G
    C       A G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     TTCTTTATTAAGAGT
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=216 (in A-loop)
AAATAATGTTGAGTGCCTGTAGAGAAATCTACAGAGTAGAACTGCTCAAAGTCGGGGAAAGCTAATAGAT
TTATCTAAAGCTAATCCCGAACCAAGCCCTTATAAAGGGAAGGTGTAGAGACTGGACGGGCGGCACCTTA
GGCTTAAAAGTGATGGTGAAGGGACAGTCCAGACCACAAACGTCAAGTTGACGGCAACGAAAGTTGAAGT
GGTAAG
Intron
Comment/Decision
Genome/Seq. Info.-

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