The detailed information of tRNA gene sequence


Sequence ID>CL170100167
Genome IDCP012073
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesOttowia sp. oral taxon 894 W10237 [CP012073]
Start position on genome 912768
End posion on genome 913086
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
aggaaaaaaa
tRNA gene sequence 
GCCTGAGTGGTGAAATCGGTAGACACAAGGGACTTAAAATCCCTGGCCGCAAGGCGTGCC
GGTTCGATTCCGGCCTCAGGCACCA
Downstream region at tRNA end position 
cttcaagcca
Secondary structure (Cloverleaf model)
>CL170100167	Leu	TAA
                   a      ACCA cttcaagcca
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C
                     A - T
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    C       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     GGCCGCAAGGCGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=234 (in A-loop)
GAAACAATTTGAGCCTCCGCGCGGAAACGCCCGGAGTGAAACCCGTCAAATTCGGCGAACGCCCCCGGCC
CCGTGCCCGGCCAACGCCGAGCCAAGCCTGCCAGCGCAGGAAGGTGTAGAGAGCAGACGGCGGGCGCCTA
AAGCCGCAAGGCCAGGGCGAAGGCGTGCTCCAGCCCACGAACGGCGGCTTTTCCTGCGCGAAAAGCCGCC
GGCGGCGAAAGCCGAAGCGGGAAG
Intron
Comment/Decision
Genome/Seq. Info.-

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