The detailed information of tRNA gene sequence


Sequence ID>CL170100175
Genome IDCP012981
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBurkholderia cepacia ATCC 25416 UCB 717 [CP012981, CP012982, CP012983]
Start position on genome 2165236
End posion on genome 2165570
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
ccgccctctt
tRNA gene sequence 
GCCGGGGTGATGAAATTGGTAAACATAGCGGACTTAAAATCCGCCGCCTTAACTGGCTTG
CCGGTTCGAGTCCGGTCCCCGGCACCA
Downstream region at tRNA end position 
cgatcgcttt
Secondary structure (Cloverleaf model)
>CL170100175	Leu	TAA
                   t      ACCA cgatcgcttt
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G G C C     A
      T A A        G      + | | | |     G
    T       A G T A       G C C G G     C
    G         | | |                 T T
    G       A C A T
      T A A        A     CGCCTTAACTGGCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=248 (in A-loop)
AAAAGATTGAGTGCCCGGCCGGAAACGGTCGGTGCAGAACCCTTCAAATTCGGCGAAACCCCTGATGCGC
GCATCGAGGCAACGCCGAGCCAAGCCTCGCGGCATCCGCGAGGAAGGTGTAGAGACTAGACGGGGGGCGC
CTAAGGCGCATGGGCAGCAGGCACGCCCGCGCGCGACGGTGAAGGCATAGTCCAGCGCACGAACGGCATC
GCATCCGCGACGCCGGCTTTGAAAGAAGCAGTGTGACG
Intron
Comment/Decision
Genome/Seq. Info.-

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK