The detailed information of tRNA gene sequence


Sequence ID>CL170100176
Genome IDCP013008
Search identical group
Phylum/ClassCyanobacteriota
SpeciesArthrospira platensis YZ [CP013008]
Start position on genome 2803308
End posion on genome 2802952
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caagcgacct
tRNA gene sequence 
GGGGGCGTGGCGGAATGGTAGACGCTACGGACTTAAAATCCGTTGACCTTCACCGGTCGT
GTGGGTTCAAGTCCCACCGCCCCCACta
Downstream region at tRNA end position 
tcatcaaacc
Secondary structure (Cloverleaf model)
>CL170100176	Leu	TAA
                   t      ACta tcatcaaacc
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     A
    G       G G C G       G T G G G     C
    G         | | |                 T T
    T       A C G C
      A G          T     TGACCTTCACCGGTCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T*A A
intron: position=35, length=271 (in A-loop)
AGAAAACTGAGCCTTGGGGTGAGAAATCCCTCAAGTGACTGCTCTCAAACTCAGGGAAACCTAAATCTGT
TCGCAGACAAGGCAATCCTGAGCCAAGCCCTTGAAGGGGTGAAGGAAATACCTAATTTCTGGAACTTCTT
GATCGGAAGGTGCAGAGACTCGACGGGAGCTACCCTAACGTTAAGCCGAGGGTAAAGGGAGAGTCCAATT
CTCAAGGCAATTAGGCGGGGATCAACCTACCTGATGCTGTAGCGAAAGCTGCGAGAGGATG
Intron
Comment/Decision
Genome/Seq. Info.-

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